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发表论文与申请专利:

A.  

A.   杂志论文(183, *通讯作者)SCI, 130:通讯作者SCI论文,97篇,另加第一作者SCI论文7)

183.       Hongxiu Xu, Yueqin Tang, Yong Nie*, and Wu, X-L*.. Comparative transcriptome analysis reveals different adaptation mechanisms for degradation of very-long chain and normal-long chain alkanes in Dietzia sp. DQ12-45-1b, Accepted for publication in Environmental Microbiology.

182.       Miaoxiao Wang, Xiaoli Chen, Yinyin Ma, Yue-Qin Tang, David R Johnson Yong Nie* and Wu, X-L*. Type IV pilus shapes a 'bubble-jet' pattern opposing spatial intermixing of two interacting bacterial populations, Accepted for publication in Microbiology Spectrum.

181.       Xiaonan Liu, Miaoxiao Wang, Yong Nie, and Wu, X-L*. Successful microbial colonization of space in a more dispersed manner, ISME Communications

180.       Hu, B.; Zhao, J.; Nie, Y*.; Qin, X.; Zhang, K.; Xing, J.; Wu, X-L*.  Bioemulsification and microbial community reconstruction in thermally processed crude oil. Microorganisms 2021, 9, x. https://doi.org/10.3390/xxxxx, Accepted

179.       Li B, Zhang K, Nie Y, Wang X, Zhao Y, Zhang XC*, Wu, X-L*: Structure of the Dietzia Mrp complex reveals molecular mechanism of this giant bacterial sodium proton pump. P.N.A.S, 2020.

178.       Wang M, Nie Y*, Wu, X-L*. (2020) Extracellular heme recycling and sharing across species by novel mycomembrane vesicles of a Gram-positive bacterium. The ISME journal 15:605-617. 10.1038/s41396-020-00800-1.

177.       Wang M, Liu X-L, Nie Y* and Wu, X-L*. Selfishness driving reductive evolution shapes interdependent patterns in spatially structured microbial communities. The ISME Journal, accepted.

176.       Fang H, Xu, J. Nie, Y*, Wu, X-L*. Pan-genomic analysis reveals that the evolution of Dietzia species depends on their living habitats Accepted by Environmental microbiology.

175.       Wang M, Nie Y*, Wu, X-L*. Membrane vesicles from a Dietzia bacterium and their roles in ‘cargoes’ delivery. Accepted by Environmental microbiology.

174.       Nie Y, Wu, X-L*: Getting back to the nature of the microbial world: from the description and inductive reasoning to deductive study after ‘meta‐omics’. Microbial Biotechnology 2020.

173.       Wang M, Geng S, Nie Y and Wu, X-L*. Sessile bacterium unlocks ability of surface motility through mutualistic interspecies interaction. Environmental Microbiology reports, accepted.

172.       Liu XW, Feng Z, Nie Y and Wu, X-L*. Isolation and characterization of a novel Pseudomonas stutzeri bacteriophage 8P. Accepted by Archives of Virology.

171.       Feng Z, Liu XW, Liu W, Nie Y* and Wu, X-L*. Isolation and characterization of a novel Bacillus phage P59, Accepted, Archives of Virology

170.       Zhou Feng, Xinwu Liu, Yong Nie*, Wu, X-L*. A novel temperate phage vB_PstS-pAN induced from the naphthalene-degrading bacterium Pseudomonas stutzeri AN10, Accepted for publication in Archives of Virology.

169.       Jie-Yu Zhao, Yan Li, Yue-Qin Tang, Yiming Jiang, Bing Hu, Chang-Qiao Chi, Yong Nie, Wu, X-L*. Thermodynamically favorable reactions shape the archaeal community, which in turn affects bacterial community assembly in chemosynthetically driven oil reservoirs. Accepted for publication in Science of the Total Environment

168.       Xinwu Liu, Miaoxiao Wang, Yong Nie* and Wu, X-L*. Isolation Chip Increases Culturable Bacterial Diversity and Reduces Cultivation Bias. Accepted for publication in Current Microbiology.

167.       Zhou Feng, He Shen, Yong Nie, Wu, X-L*. The impacts of the occupants on the bacterial communities of classrooms. Accepted for publication in Current Microbiology.

166.       Yan Y, Nie Y, An L, Tang Y-Q, Xu Z, Wu, X-L*: Improvement of Surface-Enhanced Raman Scattering Method for Single Bacterial Cell Analysis. Frontiers in Bioengineering and Biotechnology 2020, 8:1091.

165.       Bing Hu, Miaoxiao Wang, Shuang Geng, Liqun Wen, Mengdi Wu, Yong Nie*, Yue-Qin Tang, Wu, X-L*.  2020, Metabolic exchange with non-alkane-consuming Pseudomonas stutzeri SLG510A3-8 improves n-alkane biodegradation by the alkane degrader Dietzia sp. strain DQ12-45-1b. Accepted in Applied and Environmental Microbiology. DOI: 10.1128/AEM.02931-19.

164.       Shelian Lu, Yong Nie, Meng Wang, Hong-Xiu Xu, Dong-Ling Ma, Jie-Liang Liang, Wu, X-L*. 2018, Single homology arm linear DNA recombination by the non-homologous end-joining pathway as a novel and simple gene inactivation method: a proof of concept study in Dietzia sp. DQ12-45-1b, DOI: 10.1128/AEM.00795-18, Applied and Environmental Microbiology.

163.       Sun JQ, Xu L, Liu XY,  Zhao GF, Cai H,  Nie Y,  Wu, X-L*. 2018. Functional genetic diversity and culturability of petroleum-degrading bacteria isolated from oil-contaminated soils. Frontiers in Microbiology. DOI: 10.3389/fmicb.2018.01332.

162.       H Fang, XY Qin, KD Zhang, Y Nie, Wu, X-L*. 2018. Role of the Group 2 Mrp sodium/proton antiporter in rapid response to high alkaline shock in the alkaline- and salt-tolerant Dietzia sp. DQ12-45-1b. Applied Microbiology & Biotechnology, 102(5):1-13.

161.       Wen-Feng Song, Jian-Wei Wang, Ying-Chun Yan, Li-Yun An, Fan Zhang, Lu Wang, Ying Xu, Miao-Zhang Tian, Yong Nie, Wu, X-L*. 2018, Shifts of the indigenous microbial communities from reservoir production water in crude oil- and asphaltene-degrading microcosms. International Biodeterioration & Biodegradation. 132:18-29.

160.       Iulia Chiciudean, Yong Nie, Ana-Maria Tănase, Ileana Stoica, Wu, X-L*. Complete genome sequence of Tsukamurella sp. MH1: A wide-chain length alkane-degrading actinomycete. Journal of Biotechnology, 268:1-5

159.       Xing-Jian Xu, Guo-Li Lai, Chang-Qiao Chi, Jie-Yu Zhaoa, Ying-Chun Yan, Yong Nie, Wu, X-L*. 2017 Purification of eutrophic water containing chlorpyrifos by aquatic plants and its effects on planktonic bacteria. Accepted for Publication in Chemosphere.

158.       Jie-Liang Liang, Yuan Gao, Zheng He, Yong Nie, Meng Wang, Jing-hong JiangYang, Xuejun C. Zhang, Wen-Sheng Shu and Wu, X-L*. 2017. Crystal structure of the TetR family repressor, AlkX, from Dietzia sp. DQ12-45-1b implicated in biodegradation of n-alkanes, Accepted for Publication in Applied and Environmental Microbiology.

157.       Hailong Tian, Jie Liu, Tengteng Feng, Haifeng Li, Wu, X-L*, Baoan Li. 2017. Assessing the performance and microbial structure of biofilms adhering on aerated membranes for domestic saline sewage treatment, RSC Adv., 2017, 7, 27198–27205

156.       Lian Xu, Ji-Quan Sun, Xia Liu, Xiao-Zhen Liu, Ming-Quan Qiao, Wu, X-L*. 2017. Arenimonas soli sp. nov., isolated from saline-alkaline soil. International Journal of Systematic and Evolutionary Microbiology, DOI: 10.1099/ijsem.0.002026

155.       Lian Xu, Ji-Quan Sun, Li-Juan Wang, Zhi-Wei Gao, Li-Zhu Sun, Wu, X-L*. 2017. Sphingobacterium alkalisoli sp. nov., isolated from saline-alkaline soil. International Journal of Systematic and Evolutionary Microbiology, 2017, 67(6):1943-1948. DOI: 10.1099/ijsem.0.001895

154.       Lian Xu, Ji-Quan Sun, Li-Juan Wang, Xiao-Zhen Liu, Yin-Yao Ji, Zhong-Qiu Shao, Wu, X-L*. 2017. Aliidiomarina soli sp. nov., isolated from saline-alkaline soil. International Journal of Systematic and Evolutionary Microbiology, 2017, 67(3):724-728. DOI: 10.1099/ijsem.0.001709

153.       Ji-Quan Sun, Lian Xu, Yan Guo, Wei-Le Li, Zhong-Qiu Shao, Yuan-Liang Yang, Wu, X-L*. 2017. Kribbella deserti sp. nov., isolated from desert soil of rhizosphere of Ammopiptanthus mongolicus. International Journal of Systematic and Evolutionary Microbiology, 2017, 67(3):692-696. DOI: 10.1099/ijsem.0.001697

152.       Ji-Quan Sun, Lian Xu, Wu, X-L*. 2016.  Lysinibacillus alkalisoli sp. nov., isolated from saline-alkaline soil, International Journal of Systematic and Evolutionary Microbiology, DOI: 10.1099/ijsem.0.001571

151.       Hui Fang, Bing Hu, Nie Yong, Yue-Qin Tang, Wu, X-L*. 2016. The complete genome of Dietzia timorensis ID05-A0528T revealed the genetic basis for its saline-alkali tolerance, Journal of Biotechnology, DOI: 10.1016/j.jbiotec.2016.10.015.

150.       J.Y. Zhao, Shuang Geng, Lian Xu, Bing Hu, Ji-Quan Sun, Nie Yong, Yue-Qin Tang, Wu, X-L*,  2016. Complete genome sequence of Defluviimonas alba cai42T, a microbial exopolysaccharides producer, Journal of Biotechnology, DOI: 10.1016/j.jbiotec.2016.09.017

149.       Lu Wang, Nie Yong, Yue-Qin Tang, Xin-Min Song, Kun Cao, Li-Zhu Sun, Zhi-Jian Wang, Wu, X-L*, 2016, Diverse bacteria with lignin degrading potentials isolated from two ranks of coal, Frontiers in Microbiology 7, DOI: 10.3389/fmicb.2016.01428

148.       Nie Yong, J.Y. Zhao, Yue-Qin Tang, Peng Guo, Yunfeng Yang, Wu, X-L*. Fangqing Zhao, 2016, Species divergence vs. functional convergence characterizes crude oil microbial community assembly, Frontiers in Microbiology 7(20174),  DOI: 10.3389/fmicb.2016.01254

147.        Lian Xu, Ji-Quan Sun, Wu, X-L*. Xin-Ying Wang, Min Liu,  2016, Flavobacterium suaedae sp. nov., an endophyte isolated from root of Suaeda corniculata, International Journal of Systematic and Evolutionary Microbiology 66(5), , DOI: 10.1099/ijsem.0.000967

146.       Jie-Liang Liang, Yong Nie, Guang-Ming Xiong, and Wu, X-L*. 2016. Regulation of alkane degradation pathway by a TetR family repressor via an autoregulation positive feedback mechanism in a Gram‐positive Dietzia bacterium, Molecular Microbiology. DOI: 10.1111/mmi.13232

145.       Jie-liang Liang, Yong Nie and Wu, X-L*. 2016. Regulation of the alkane hydroxylase gene CYP153 in a Gram-positive alkane degrading bacterium Dietzia sp. DQ12-45-1b.  Applied and Environmental Microbiology. 82(2): 608-619

144.       Hailong Tian, Yingchun Yan, Yuewen Chen, Wu, X-L*, Baoan Li. Process performance and bacterial community structure under increasing influent disturbances in a membrane-aerated biofilm reactor, Journal of Microbiology and Biotechnology. 2016, 26(2):373-384.

143.       Ji-Quan Sun, Xin-Ying Wang, Li-Juan Wang, Lian Xu, Min Liu, Wu, X-L*, 2016.  Saccharibacillus deserti sp. nov., isolated from desert soil, International Journal of Systematic and Evolutionary Microbiology. 66(2):623-627.

142.       Ji-Quan Sun, Min Liu,  Xin-Ying Wang,  Lian Xu, Wu, X-L*,  2015, Sphingobacterium suaedae sp. nov., isolated from rhizosphere soil of Suaeda corniculata in Inner Mongolia, China, International Journal of Systematic and Evolutionary Microbiology. 65(12):4508-4513.

141.       Bing Hu, Yong Nie, Shuang Geng, Xiao-Lei Wu Wu, X-L*, 2015. Complete genome sequence of the petroleum-emulsifying bacterium Pseudomonas stutzeri SLG510A3-8, Journal of Biotechnology. Journal of Biotechnology. 211:1–2

140.       Man Cai, Yue-Qin Tang, Yunfeng Yang, Xing-Biao Wang, Chang-Qiao Chi, Yong Nie, Yan Li, Ze-Shen Liu, Jizhong Zhou, Han-Ping Dong, Li-Xin Huang, Wu, X-L*. 2015. Crude oil as a microbial seed bank with unexpected functional potentials, Scientific Reports. 5: 16057, doi:10.1038/srep16057.

139.       Meng Wang, Guo-Li Lai, Yong Nie, Shuang Geng, Liming Liu, Baoli Zhu, Zhongping Shi and Wu, X-L*. 2015. Synergistic function of four novel thermostable glycoside hydrolases from a long-term enriched thermophilic methanogenic community, Frontiers in Microbiology. 6:509. doi: 10.3389/fmicb.2015.00509

138.       Ji-Quan Sun, Lian Xu, Li-Juan Wang, Wu, X-L*. Draft Genome sequence of Rhodococcus strain isolated from tannery wastewater treatment sludge. Genome Announcements, 2015, 3(1): e01463-14.

137.       Yi-Jing Luo, Bai-Sheng Xie, Xiang-Lin Lv, Man Cai, Ya-Nan Wang, Heng-Lin Cui, Hua Cai and Wu, X-L*. 2015. Marinobacter shengliensis sp. nov., a moderately halophilic bacterium isolated from oil-contaminated saline soil, Antonie van Leeuwenhoek Journal of Microbiology, 107(4):1085-94.

136.       Xin-Chi Pan, Shuang Geng, Xiang-Lin Lv, Ran Mei, Ya-Nan Wang, Lian Xu, Xue-Ying Liu, Yue-Qin Tang and Wu, X-L*. 2015. Defluviimonas alba sp. nov., isolated from an oilfield in Xinjiang. International Journal of Systematic and Evolutionary Microbiology. 65(6):1805-11

135.       Bing Hu, Qian Yang, Man Cai, Yue-Qin Tang, Gui-Fang Zhao and Wu, X-L*,   2015. Negadavirga shengliensis gen. nov., sp. nov., a novel member of the family Cyclobacteriaceae isolated from oil-contaminated saline soil. Antonie van Leeuwenhoek Journal of Microbiology, 107(3):663-73.

134.       Shenghua Gu, Bei Cao, Runbin Sun, Yueqing Tang, Janice L. Paletta, Wu, X-L*, Linsheng Liu, Weibin Zha, Chunyan Zhao, Yan Li, Jason M. Radlon, Phillip B. Hylemon, Huiping Zhou, Jiye Aa* and Guangji Wang, 2015. A metabolomic and pharmacokinetic study on the mechanism underlying the lipid-lowering effect of orally administered berberine, Molecular BioSystems, 11(2):463-74.

133.       Xu XJ, Sun JQ, Nie Y, Wu, X-L*, 2015. Spirodela polyrhiza stimulates the growth of its endophytes but differentially increases their fenpropathrin-degradation capabilities, Chemosphere, 125:33-40.

132.       Shuang Geng, Xin-Chi Pan, Ran Mei, Ya-Nan Wang, Xue-Ying Liu, Yue-Qin Tang and Wu, X-L*, 2015. Glycocaulis daqingensis sp. nov., a novel dimorphic prosthecate bacterium isolated from an oilfield, International Journal of Systematic and Evolutionary Microbiology, 65:838-44.

131.       Hai-Long Tian, Jie-Yu Zhao, Hong-Yu Zhang, Chang-Qiao Chi, Bao-An Li, Wu, X-L*, 2015. Bacterial community shift along with the changes in operational conditions in a membrane-aerated biofilm reactor, Applied Microbiology and Biotechnology, 99(7):3279-90.

130.       Bai-Sheng Xie, Xiang-Lin Lv, Man Cai, Yue-Qin Tang, Ya-Nan Wang, Heng-Ling Cui, Xue-Ying Liu, Yan Tan and Wu, X-L*, 2015. Plastorhodobacter daqingensis gen. nov., sp. nov., a non-phototrophic bacterium isolated from Daqing Oilfield, Current Microbiology, 70(5):657-64.

129.       Shuang Geng, Xin-Chi Pan, Ran Mei, Ya-Nan Wang, Ji-Quan Sun, Xue-Ying Liu, Yue-Qin Tang and Wu, X-L*, 2015. Paradevosia shaoguanensis sp. nov., isolated from a coking wastewater, Current Microbiology, 70(1):110-8.

128.       Xiang-Lin Lv, Bai-Sheng Xie, Man Cai, Yue-Qin Tang, Ya-Nan Wang, Heng-Ling Cui, Xue-Ying Liu, Yan Tan and Wu, X-L*, 2015. Halodurantibacterium flavum gen. nov., sp. nov., a non-phototrophic bacterium isolated from an oil production mixture. Current Microbiology, 70(1):141-8.

127.       Shelian Lu, Yong Nie, Guangming Xiong, Wu, X-L*, 2014. A critical combination of operating parameters can significantly increase the electrotransformation efficiency of a gram-positive Dietzia strain, Journal of Microbiological Methods, 103:144-151.

126.       Bai-Sheng Xie, Xiang-Lin Lv, Man Cai, Yue-Qin Tang, Ya-Nan Wang, Heng-Ling Cui, Xue-Ying Liu, Yan Tan, and Wu, X-L*,(2014)  Seohaeicola nanhaiensis sp. nov., a moderately halophilic bacterium isolated from the benthic sediment of South China Sea, Current Microbiology. 69:802–808

125.       Xiang-Lin Lv, Bai-Sheng Xie, Man Cai, Yue-Qin Tang, Ya-Nan Wang, Heng-Ling Cui, Xue-Ying Liu, Si-Yuan Ye and Wu, X-L*, Glycocaulis albus sp. nov., a moderately halophilic dimorphic prosthecate bacterium isolated from petroleum contaminated saline soil. International Journal of Systematic and Evolutionary Microbiology, 64:3181-3187

124.       Yong Nie, Chang-Qiao Chi, Hui Fang, Jie-Liang Liang, She-Lian Lu, Guo-Li Lai, Yue-Qin Tang, Wu, X-L*, Diverse alkane hydroxylase genes among microorganisms and major environments, Scientific Report, 4.

123.       Xin-Chi Pan, Shuang Geng, Ran Mei, Ya-Nan Wang, Hua Cai, Xue-Ying Liu, Yue-Qin Tang and Wu, X-L*, Nitratireductor shengliensis sp. nov., isolated from an oil-polluted saline soil, Current Microbiology, 69:561-566

122.       Jian Chen, Yue-Qin Tang, Yan Li, Linlin Hou, Xi-Qing Li and Wu, X-L*, 2014, Impacts of different nanoparticles on functional bacterial community in activated sludge. Chemosphere, 104:141-148.

121.       Ji-Quan Sun, Lian Xu, Zhao Zhang, Yan Li, Yue-Qin Tang, Wu, X-L*, 2014, Diverse bacteria isolated from microtherm oil production water, Antonie van Leeuwenhoek Journal of Microbiology, 105:401-411

120.       Shuang Geng, Xin-Chi Pan, Ran Mei, Ya-Nan Wang, Ji-Quan Sun, Xue-Ying Liu, Yue-Qin Tang and Wu, X-L*, 2014. Ottowia shaoguanensis sp. nov., isolated from coking wastewater, Current Microbiology, 68:324–329.

119.       Yong Nie, Jie-Liang Liang, Hui Fang, Yue-Qin Tang and Wu, X-L*. (2014), Characterization of a CYP153 alkane hydroxylase gene in a Gram-positive Dietzia sp. DQ12-45-1b and its “team role” with alkW1 in alkane degradation, Applied Microbiology and Biotechnology. 98:163–173. DOI10.1007/s00253-013-4821-1.

118.       Ji-Quan Sun, Lian Xu, Yue-Qin Tang, Fu-Ming Chen, Jing-Jing Zhao, Wu, X-L*. (2014) Bacterial pyridine hydroxylation is ubiquitous in environment. Applied Microbiology and Biotechnology. 98:455–464. DOI 10.1007/s00253-013-4818-9.

117.       Shenghua Gu, Dandan Chen, Jin-Na Zhang, Xiaoman Lv, Kun Wang, Li-Ping Duan, Wu, X-L*, (2013) Bacterial community mapping of the mouse gastrointestinal tract, PLoS ONE 8(10): e74957. doi:10.1371/journal.pone.0074957 (F1000Prime recommended)

116.       Yong Nie, Yue-Qin Tang, Yan Li, Chang-Qiao Chi, Peng Guo, Gang Shen and Wu, X-L*. 2013, The Genome of the Moderate Halophile Amycolicicoccus subflavus DQS3-9A1T Reveals Four Alkane Hydroxylation Systems and Provides Some Clues on the Genetic Basis for Its Adaptation to a Petroleum Environment. PLoS One 8(8): e70986. doi:10.1371/journal.pone.0070986.

115.       Lu Wang, Yue-Qin Tang, Peng Guo, Yi-jing Luo, Wu, X-L*, Hao Wang. 2013. Microbial functioning on crude oil in a gas-permeable single microfluidic channel, Journal of Petroleum Science and Engineering.

114.       Xing-Biao Wang, Yong Nie, Yue-Qin Tang, Gang Wu, Wu, X-L*. 2013. n-Alkane Chain Length Alters Dietzia sp. Strain DQ12-45-1b Biosurfactant Production and Cell Surface Activity. Applied and Environmental Microbiology. 79:400-402.

113.       Linlin Hou, Jing Xia, Kaiyang Li, Jian Chen, Wu, X-L*, Xiqing Li*, 2013, Removal of ZnO nanoparticles in simulated wastewater treatment processes and its effects on COD and NH4+-N reduction. Water Science and Technology. 67:254-260. doi: 10.2166/wst.2012.530.

112.       Ji-Quan Sun, Lian Xu, Yue-Qin Tang, Fu-Ming Chen, Wu, X-L*. 2012, Simultaneous degradation of phenol and n-hexadecane by Acinetobacter strains, Bioresource Technology, 123: 664-668.

111.       Anhuai Lu, Yan Li, Song Jin, Xin Wang, Wu, X-L*, Cuiping Zeng, Yan Li, Hongrui Ding, Ruixia Hao, Ming Lv, Changqiu Wang, Yueqin Tang and Hailiang Dong, 2012, Growth of non-phototrophic microorganisms on solar energy through mineral photocatalysis, Nature Communications. 3:768 doi: 10.1038/ncomms1768.

110.       Xiao-Cui Gong, Ze-Shen Liu, Peng Guo, Chang-Qiao Chi, Jian Chen, Xing-Biao Wang, Yue-Qin Tang, Wu, X-L*, Chun-Zhong Liu, 2012, Bacteria in Crude Oil Survived Autoclaving and Stimulated Differentially by Exogenous Bacteria. PLoS ONE 7(9): e40842. doi:10.1371/journal.pone.0040842.

109.       Fen Wang, Yuhui Li, Lei Chen, Dandan Chen, Wu, X-L*, Hao Wang*, 2012, Mapping of hyperthermic tumor cell death in a microchannel under unidirectional heating. Biomicrofluidics. 6, 014120, doi: 10.1063/1.3694252.

108.       Weimin Chen, Yue-Qin Tang, Wu, X-L*, 2012, Distribution of endophytic bacteria in different aquatic plants and their potential for bioremediation of the aquatic environment, Aquatic Biology 15: 99–110.

107.       Yue-Qin Tang, Yan Li, Jie-Yu Zhao, Chang-Qiao Chi, Li-Xin Huang, Han-Ping Dong, Wu, X-L*, 2012, Microbial communities in long-term, water-flooded petroleum reservoirs with different in situ temperatures in the Huabei Oilfield, China, PLoS ONE, 7(3): e33535.

106.       Yong Nie, Yue-Qin Tang, Yan Li, Chang-Qiao Chi, Man Cai and Wu, X-L*. 2012, The Genome Sequence of Polymorphum gilvum SL003B-26A1T Reveals Its Genetic Basis for Crude Oil Degradation and Adaptation to the Saline Soil. PLoS ONE 7(2): e31261. doi:10.1371/journal.pone.0031261.

105.       Linlin Hou, Kaiyang Li, Yuanzhao Ding, Yan Li, Jian Chen, Wu, X-L*, Xiqing Li*, 2012, Removal of silver nanoparticles in simulated wastewater treatment processes and its impact on COD and NH4-N reduction, Chemosphere, 87:248–252.

104.       Chen, J., Tang, Y. Q. and Wu, X-L* (2012) Bacterial community shift in two sectors of a tannery plant and its Cr (VI) reducing potential, Geomicrobiology Journal, 29:1-10.

103.       Tang, Y.-Q., Ji, P., Lai, G.-L., Chi, C.-Q., Liu, Z.-S. and Wu, X-L*. (2012) Diverse microbial community in the coalbeds in Ordos Basin, China, International Journal of Coal Geology, 90-91:21-33(doi:10.1016/j.coal.2011.09.009).

102.       Nie, Y, Liang, JL, Fang H, Tang YQ, and Wu, X-L* (2011) Two novel alkane hydroxylase-rubredoxin fusion genes isolated from a Dietzia bacterium and the functions of fused rubredoxin domains in long-chain n-alkane degradation, Applied and Environmental Microbiology, 77:7279-7288.

101.       Tang, Y.-Q., Ji, P., Hayashi, J., Koike, Y., Wu, X-L*, Kida, K. 2011, Characteristic microbial community of a dry thermophilic methanogenic digester: its long-term stability and change with feeding, Applied Microbiology and Biotechnology, 91(5): 1447-1461.

100.       Yu, S. L., Li, S. G., Tang, Y.-Q., Wu, X-L*, 2011, Succession of bacterial community along with the removal of heavy crude oil pollutants by multiple biostimulation treatments in the Yellow River Delta, China, Journal of Environmental Sciences,  23(9):1533-1543.

99.  Cai, M., Chen, W. M., Nie, Y., Chi, C. Q., Wang, Y. N., Tang, Y.-Q., Li, G. Y., Wu, X-L*  (2011) Complete Genome Sequence of Amycolicicoccus subflavus DQS3-9A1T, an actinomycete isolated from crude oil polluted soil, Journal of Bacteriology. 193(17):4538–4539.

98.  Wang, X. B., Chi, C. Q., Nie, Y., Tang, Y.-Q., Tan, Y., Wu, G., Wu, X-L* (2011) Degradation of petroleum hydrocarbons (C6-C40) and crude oil by a novel Dietzia strain. Bioresource Technology. 102:7755–7761.

97.  Sun, J. Q., Xu, L., Tang, Y.-Q., Liu, W. Q., Wu, X-L*, Chen F. M., (2011) Degradation of pyridine by one Rhodococcus strain in the presence of chromium (Ⅵ) or phenol, Journal of Hazardous Materials, 191:62-68.

96.  Li, S. G., Tang, Y.-Q., Nie, Y., Cai, M. and Wu, X-L*. (2011) Complete Genome Sequence of Polymorphum gilvum SL003B-26A1T, A Crude Oil Degrading Bacterium from Oil-Polluted Saline Soil, Journal of Bacteriology, 193 (11): 2894-2895.

95.  Cai, M., Wang, L., Cai, H., Li, Y., Tang, Y.-Q. and Wu, X-L*, (2011) Rubrimonas shengliensis sp. nov. and Polymorphum gilvum gen. nov., sp. nov., novel members of Alphaproteobacteria from crude oil contaminated saline soil, Systematic and Applied Microbiology, 34: 321–327.

94.  Cai, M., Wang, L., Cai, H., Li, Y., Wang, Y-N, Tang, Y. Q., and Wu, X-L* (2011) Salinarimonas ramus sp. nov. and Tessaracoccus oleiagri sp. nov., isolated from a crude oil contaminated saline soil, International Journal of Systematic and Evolutionary Microbiology, 61(8):1767-1775.

93.  Yu, S.-L., Tang, Y-Q, Li, Y., Zhang, H., Wu, X-L* (2010) Gradient decrement of annealing time can improve PCR with fluorescent-labeled primers, Journal of Bioscience and Bioengineering, 110:500-504.

92.  Wang, Y-N, Chi, C-Q, Cai, M, Lou, Z-Y, Tang Y-Q, Zhi, X-Y, Li, W-J, Wu, X-L*, Du, X, (2010) Amycolicicoccus subflavus gen. nov., sp. nov., an actinomycete isolated from a saline soil contaminated by crude oil, International Journal of Systematic and Evolutionary Microbiology, 60:638-643.

91.  Wu*, X L, Yu, S-L, Gu, J, Zhao, G-F and Chi C-Q (2009) Filomicrobium insigne sp. nov., isolated from an oil-polluted saline soil, International Journal of Systematic and Evolutionary Microbiology. 59:300-305.

90.  Wu, G, Wu, X-Q, Wang, Y-N, Chi, C-Q, Tang,Y-Q, Kida, K, Wu*, X L, Luan, Z-K (2008 ) Halomonas daqingensis sp. nov., a moderately halophilic bacterium isolated from an oilfield soil, International Journal of Systematic and Evolutionary Microbiology. 58: 2859-2865.

89.  Gu, J, Guo, B, Wang, Y-N, Yu, S-L, Inamori, R, Qu, R, Ye Y-G and Wu*, X L,(2007) Oceanicola nanhaiensis sp. nov., isolated from sediments of the South China Sea, International Journal of Systematic and Evolutionary Microbiology. 57:157-160.

88.  Gu, J., Cai, H., Qu, R., Yin, B., Guo, Y.-F., Zhao, J.-Y., and Wu*, X L (2007) Marinobacter gudaonensis sp. nov., isolated from an oil-polluted saline soil in Gudao, Shengli Oilfield, China, International Journal of Systematic and Evolutionary Microbiology. 57: 250-254.

87.  Wang, Y-N, Cai, H, Yu, S.-L., Wang, Z-Y, Liu, J and Wu*, X L (2007), Halomonas gudaonensis sp. nov., isolated from a saline soil contaminated by crude oil, International Journal of Systematic and Evolutionary Microbiology. 57: 911-915.

86.  Wang, Y-N, Cai, H, Yu, S.-L., Lu, A-H, Lin, X-G, Jiang, Z-F., Wu*, X L (2007) Halomonas shengliensis sp. nov., a moderately halophilic, denitrifying, crude-oil-utilizing bacterium, International Journal of Systematic and Evolutionary Microbiology. 57: 1222-1226.

85.  Guo, B, Gu, J, Ye, Y-G, Tang, Y Q, Kida, K, Wu*, X L (2007) Marinobacter segnicrescens sp. nov., a moderate halophile isolated from benthic sediment of the South China Sea, International Journal of Systematic and Evolutionary Microbiology, 57:1970-1974.

84.  Wu, X. L, Friedrich, M W and Conrad R. (2006) Diversity and ubiquity of thermophilic methanogenic archaea in temperate anoxic soils. Environmental Microbiology, 8 (3):394~404.

83.  Wu, X. L., Chin, K. J. and Conrad, R. (2002) Effect of temperature stress on the structure and function of the methanogenic archaeal community in a rice field soil, FEMS Microbiol. Eco., 39: 211-218.

82.  Wu, X. L, Guan, Y. T, Zhang, X. L., Huang, X. and Qian, Y. (2002) Phosphorus Removal and Greenhouse Gas N2O Emission in A Lime-Induced Aerobic Sludge Granule Process, Environmental Technology, 23:677-684.

81.  Wu X. L., and Conrad, R. (2001) Functional and structural response of a cellulose-degrading methanogenic microbial community to multiple aeration stresses at two different temperatures, Environmental Microbiology, 3 (6):355-362.

80.  Wu, X. L., Chin, K-J, Stubner, S and Conrad, R (2001) Functional patterns and temperature response of cellulose-fermenting microbial cultures containing different methanogenic communities, Applied Microbiology and Biotechnology, 56:212-219.

79.  Wu, X. L., Zhou, P., and Qian, Y. (1999), Performance of an internal circulating three-phase fluidized bed bioreactor in treating petrochemical wastewater, Environmental Technology, 20:269-275.

78.  Inamori, Y., Wu*, X. L. and Mizuochi, M. (1997) N2O producing capability of Nitrosomonas europaea, Nitrobacter winogradskyi and Alcaligenes faecalis, Water Science and Technology 36(10).  (IF,2010:1.056)

77.  M Shi,Y Wei,Y Nie,C Wang,X Wu, Alterations and correlations in microbial community and metabolome characteristics in generalized aggressive periodontitis, Frontiers in Microbiology.

76.  Danni Wu, Xiao-Juan Zhang, Hong-Can Liu, Yu-Guang Zhou, Xiao-LeiWu, YongNie, Ying-Qian Kang, Man Cai, Azospirillum oleiclasticum sp. nov, a nitrogen-fixing and heavy oil degrading bacterium isolated from an oil production mixture of Yumen Oilfield, Systematic and Applied Microbiology.

75.  Danni Wu; Hongcan Liu; Yuguang Zhou; Xiaolei Wu; Yong Nie; Man Cai Roseomonas oleicola sp. nov., isolated from an oil production mixture in Yumen Oilfield,and emended description of Roseomonas frigidaquae. Accepted for publication International Journal of Systematic and Evolutionary Microbiology

74.  Xiao-Juan Zhang, Hong-Can Liu, Yu-Guang Zhou, Wu, X. L, Yong Nie, Qi-Rui Li, Mei-Zhu Wang, Liang Zhao, Man Cai & Ying-Qian Kang, (2020)  Pseudomonas Saliphila sp. nov., a Bacterium Isolated from Oil-Well Production Water in Qinghai Oilfield of China, Current Microbiology, 77: 1924–1931

73.  Yiping Wei, Meng Shi, Min Zhen, Cui Wang, Wenjie Hu, Yong Nie and Wu, X. L. Comparison of subgingival and buccal mucosa microbiome in chronic and aggressive periodontitis: a pilot study. Frontiers in cellular and infection microbiology, 2019, 9: 53.

72.  Guiping Ren, Yingchun Yan, Yong Nie, Anhuai Lu, Wu, X. L, Yan Li, Changqiu Wang and Hongrui Ding. Natural extracellular electron transfer between semiconducting minerals and electroactive bacterial communities occurred on the rock varnish. Frontiers in microbiology, 2019, 10:293.

71.  Jian‑Wei Wang, Man Cai, Yong Nie, Bing Hu, Ying Yang, Wu, X. L. Pseudomonas jilinensis sp. nov., isolated from oil production water of Jilin ilfield in China. Current microbiology, 2019: 1-7.

70.  Li, Yan,  Wang, Xiao  Li, Yanzhang,  Duan, Jianshu,  Jia, Haoning,  Ding, Hongrui,  Lu, Anhuai,  Wang, Changqiu,  Nie, Yong,  Wu, X. L. Coupled anaerobic and aerobic microbial processes for Mn-carbonate precipitation: A realistic model of inorganic carbon pool formation. Geochimica et Cosmochimica Acta, 2019, 256: 49-65.

69.  Meng Shi, Yiping Wei, Wenjie Hu, Yong Nie, Xiaolei Wu and Ruifang Lu. 2018. The Subgingival Microbiome of Periodontal Pockets with Different Probing Depths in Chronic and Aggressive Periodontitis: A Pilot Study. Front. Cell. Infect. Microbiol.,. https://doi.org/10.3389/fcimb.2018.00124

68.  Guiping Ren, Yingchun Yan, Manyi Sun, Xiao Wang, Wu, X-L, Yan Li, Anhuai Lu & Hongrui Ding. 2018. Considerable Bacterial Community Structure Coupling with Extracellular Electron Transfer at Karst Area Stone in Yunnan, China. Geomicrobiology Journal 35(2):1-8.

67.  Yue Liu, Ming-Zhu Ding, Wei Ling, Yun Yang, Xiao Zhou, Bing-Zhi Li, Tao Chen, Yong Nie, Miaoxiao Wang, Bo-Xuan Zeng, Xia Li, Hong Liu, Baode Sun, Heming Xu, Jiamei Zhang, Yi Jiao, Yanan Hou, Hui Yang, Sijia Xiao, Qucheng Lin, Xinzi He, Wenjie Liao, Zeqi Jin, Yufei Xie, Bofeng Zhang, Tianyu Li, Xi Lu, Jiabei Li, Fan Zhang, Xiao-Lei Wu, Hao Song, Ying-Jin Yuan, (2017) A three-species microbial consortium for power generation, Energy & Environmental Science 10(7), DOI: 10.1039/C6EE03705D.

66.  Yixuan Liu, Lu Zhang, Xiaoqi Wang, Fumeng Wang, Jingjing Zhang, Ronghuan Jiang, Xiangqun Wang, Kun Wang, Zuojing Liu, Zhiwei Xia, Zhijie Xu, Nie Yong, Xianglin Lv, Wu, X-L, Huaiqiu Zhu, LIping Duan, 2016, Similar Fecal Microbiota Signatures in Patients With Diarrhea-predominant Irritable Bowel Syndrome and Patients With Depression, Clinical Gastroenterology & Hepatology,  DOI: 10.1016/j.cgh.2016.05.033

65.  Yun-Cheng Li, Kanako Mitsumasu, Zi-Xi Gou, Min Gou, Yue-Qin Tang, Guo-Ying Li, Wu, X. L., Takashi Akamatsu, Hisataka Taguchi, Kenji Kida, 2016. Xylose fermentation efficiency and inhibitor tolerance of the recombinant industrial Saccharomyces cerevisiae strain NAPX37. Applied microbiology and biotechnology

64.  Yixuan Liu, Lu Zhang, Xiaoqi Wang, Fumeng Wang, Xianglin Lv, Yong Nie, Wu, X-L, Huaiqiu Zhu, Li-ping Duan, Characterization of intestinal microbiome in diarrhea-predominant irritable bowel syndrome, depression patients and their comorbidity, Gastroenterology. 148(4):S-119, DOI: 10.1016/S0016-5085(15)30415-7

63.  Huiqin Zhang, Yan Li, Xin Wang, Anhuai Lu, Hongrui Ding, Cuiping Zeng, Xiao Wang, Wu, X-L, Yong Nie, Changqiu Wang, Aerobic and anaerobic reduction of birnessite by a novel Dietzia strain. Geochemical Transactions. 2015, 16:11. DOI:10.1186/s12932-015-0026-0

62.  Ze-Shen Liu, Wu, X-L, Kenji Kida, Yue-Qin Tang, 2012, Effect of saccharification condition on sugar recovery and by-product generation during corn stover saccharification with concentrated sulfuric acid, Bioresource Technology, 119:224-233.

61.  Kristanti, R A, Kanbe, M, Toyama, T, Tanaka, Y, Tang, Y.-Q., Wu, X.-L. and Mori, K. (2012) Accelerated biodegradation of nitrophenols in the rhizosphere of Spirodela polyrrhiza, Journal of Environmental Sciences, 24 (15): 800–807.

60.  Zhuang, D-C, Chen, Y-G, Zhang, Y-Q, Tang, S-K, Wu, X-L, Tan, Z-C, Li, W-J, Cui, X-L. (2009). Marinobacter zhanjiangensis sp. nov., a marine bacterium isolated from sea water of a tidal flat of the South China Sea. Antonie van Leeuwenhoek, 96:295-301.

59.  Li, Y, Lu, AH, Wang, CQ, Wu, X L 2008 Characterization of natural sphalerite as a novel visible light-driven photocatalyst , Solar Energy Materials and Solar Cells, 92(8):953-959.

58.  Yue-Qin Tang, Ming-Zhe An, Ya-Ling Zhong, Morimura Shigeru, Xiao-Lei Wu, Kenji Kida. (2010) Continuous ethanol fermentation from non-sulfuric acid-washed molasses using traditional stirred tank reactors and a flocculating yeast strain KF-7. Journal of Bioscience and Bioengineering, 109 : 41-46.

57.  Kai Liu. Yueqin Tang, Toru Matsui, Shigeru Morimura, Xiao-Lei Wu, and Kenji Kida. (2009) Thermophilic anaerobic co-digestion of garbage, screened swine and dairy cattle manure. Journal of Bioscience and Bioengineering. 107:54-60.

56.  Yue-Qin Tang, Toru Matsui, Shigeru Morimura, Xiao-Lei Wu, Kenji Kida (2008). Effect of temperature on microbial community of a glucose-degrading methanogenic consortium in chemostat cultivation at hyperthermophilic conditions. Journal of Bioscience and Bioengineering. 106(2):180-187.

55.  Yue-Qin Tang, Yoji Koike, Kai Liu, Ming-Zhe An, Shigeru Morimura, Xiao-Lei Wu, Kenji Kida. (2008) Ethanol production from kitchen waste using the flocculating yeast Saccharomyces cerevisiae strain KF-7. Biomass and Bioenergy. 32:1037-1045.

54.  Cheng, L, Qiu, T L, Yin, X B,  Wu, X L, Hu, G Q, Deng, Y and Zhang, H, (2007), Methermicoccus shengliensis gen. nov., sp. nov., a thermophilic, methylotrophic methanogen isolated from oil-production water, and proposal of Methermicoccaceae fam. nov.,  International Journal of Systematic and Evolutionary Microbiology. 57:2964-2969.

53.  马世昌  吴晓磊, 安徽省农业生态经济系统能值分析, 《中国农业资源与区划》,2019年12期。

52.  郑鑫,王蒙,黄晓雨,王淼啸,黄婷,方源,聂勇,吴晓磊,汪家权,Dietzia菌随机插入突变体文库的构建及新型功能基因的筛选。应用环境微生物学报,

51.  胡玉玺,吴晓磊,马世昌,郭啸,刘新儒,2018,湿地 “三生” 空间耦合的系统动力学模型实证分析——以西溪国家湿地公园为例, 经济地理 7, 173-180

50.  胡玉玺; 刘新儒; 吴晓磊; 孙道元; 董陇军,磷化工清洁生产评估模型研究现状与建议

49.  王璐,聂勇,宋新民,吴朝东,魏小芳,吴晓磊. 油藏微生物及其压力适应机制,《微生物学通报》2016,11:2495-2505。

48.  王丽娟, 徐莲, 孙纪全* 吴晓磊*. 骆驼刺根际细菌的植物促生效果. 应用与环境生物学报, 2016, 23(4): 1135-1141.

47.  孙纪全*, 徐莲, 陈福明, 吴晓磊*. Diaphorobacter sp. J5-51降解酚类污染物的特性. 应用与环境生物学报. 2016, 22(3): 393-396.

46.  马冬玲,聂勇,吴晓磊*,刘立明. 2015. 细菌Dietzia sp. DQ12-45-1b中两种长链烷烃羟化酶基因的克隆及鉴定,应用与环境生物学报,21:813-818。

45.  Yan Li, Tadashi Toyama, Yasuhiro Tanaka, Yueqin Tang, Wu, X L, Kazuhiro Mori, 2014. Effects of various duckweed species on phenol degradation in environmental waters. Japanese Journal of Water treatment Biology 50:95-103.

44.  蔡曼,池昌桥,关越,汤岳琴,吴晓磊,李国英,2012,石油厌氧降解促进CO2的CH4转化研究, 应用与环境生物学报,18:775-779。

43.  王兴彪,汤岳琴,吴钢,吴晓磊,2013,细菌Dietzia sp. DQ12-45-1b代谢十六烷产物分析和检测方法优化, 应用与环境生物学报,19:519-522。

42.  王兴彪,张晴,刘洋,汤岳琴,吴钢,吴晓磊,2013,脱水原油中微生物的存在及其原油降解活性, 应用与环境生物学报,19:515-518。

41.  陈丹丹,顾胜华,张金娜,宝福凯,汤岳琴,吴晓磊,2013,肠道菌群对免疫系统的影响及其群落分析方法,应用与环境生物学报,19:542-546。

40.  徐莲,孙纪全,吴晓磊,汤岳琴,陈福明,2012,菌株Rhodococcus sp. Chr-9和Exiguobacterium sp. Chr-43的除铬(VI)特性,应用与环境生物学报,18:971-977。

39.  徐莲,孙纪全,吴晓磊,刘伟强,汤岳琴,陈福明,2011,不动杆菌属菌株WX-19还原Cr(Ⅵ)与降解苯酚特性,矿物学报, 31(4): 654-661。

38.  孙纪全,徐莲,汤岳琴,吴晓磊,陈福明,2012,红球菌Chr-9降解吡啶和苯酚的特性. 应用与环境生物学报.,18(4):647-650。

37.  孙纪全,汤岳琴,刘伟强,徐莲,赵晶晶,吴晓磊,陈福明,2010,两株假单胞菌降解酚类化合物的特性,中国环境科学, 30:1633-1638。

36.  孙天晴; 郑一; 王昊; 吴晓磊,中国城市能源系统可持续性评价体系实证研究,中国人口.资源与环境, 2010, (11): 1-6.

35.  两株假单胞菌降解酚类吴淼,汤岳琴,于萍,周元祥,吴晓磊,2009,Cr (VI)抗性菌株的筛选及Cr (VI)去除特性研究,岩石矿物学杂志,28:520-526。

34.  吴亚嫚,谷峻,谭燕,池昌桥,汤岳琴,吴晓磊,2009,油井采出液中微生物群落结构的T-RFLP分析,土壤学报, 46(5):878-886。

33.  余素林,赵桂芳,刘芳,吕楠曦,郭斌,吴晓磊*,2007,石油污染土壤微生物治理技术发展方向,(Strategy for Development of Technolog ies for Oil contaminated Soil Bioremediation, Journal of Agricultural Science and Technology),中国农业科技导报,9(4):55-60。

32.  仇天雷,承磊,罗辉,张辉,吴晓磊,邓宇,2007,一株近海沉积物中产甲烷菌的分离及鉴定,中国沼气. 25(2):3-6,10。

31.  陈康,周元祥,吴晓磊,王赞,2008,原油降解工程菌的构建及其降解性能研究,广西轻工业. 24(8):69-70,99。

30.  唐黎,张永军,吴晓磊*,2007,转Bt基因棉花根际细菌与古菌群落结构分析,《土壤学报》,(Bacterial and archaeal community structure in rhizosphere soil planting bt transgenetic cotton, Acta Pedologica Sinica ) 44(4): 717-726。

29.  刘芳,叶思源,汤岳琴,滝川清,木田建次,吴晓磊,2007,黄河三角洲湿地土壤微生物群落结构分析,《应用与环境生物学报》,13(5):691-696。

28.  谭 燕, 程杰成,屈 睿, 吴晓磊*,2007,油井采出液中硝酸盐还原菌的分离培养及对硫酸盐还原的抑制. 《应用与环境生物学报》,13(3):390-394。

27.  刘 芳,吴晓磊*,2007,指示水体病原污染的微生物及其检测,<<环境工程学报 >>,Microorganisms indicating pathogen contamination in waters and their detection (Techniques and Equipment for Environmental Pollution Control ) 1(2): 139-144。

26.  谷峻,石成芳,吴晓磊*,赵俊义,2007,研究油藏微生物群落的方法学,(Progress in Methodological Research of Microbial Community in Oil Fields, Acta Ecologica Sinica)《生态学报》,27(1): 323-328。

25.  郭斌,吴晓磊*,钱易,2006,提高微生物可培养性的方法和措施,《微生物学报》,46(3):504-507。

24.  曾景海,吴晓磊*,赵桂芳,钱易,2006,油田回注水中硫酸盐还原原核生物的快速检测和群落结构分析,《环境科学》,27: 972~976(EI检索)。

23.  余素林,吴晓磊*,钱易,2006,环境微生物群落分析的T-RFLP技术及其优化措施,《应用与环境生物学报》, 12(6):861-868。

22.  赵桂芳,吴晓磊*,曾景海,李佳,钱易,2006,胜利油田外排水中铁细菌主要类群的检测及群落结构分析,《应用与环境生物学报》,12(6):828-832。

21.  Li, M, Wu, Y-J, Zhang, J, Yu, H-Q, Wu, X-L, Yu, Z-L (2006) Study on ion beam application to improve aquatic macrophyte remediation  capacity in eutrophic waters, Acta Hyrdobiologica Sinica, 30 (6):711-717.

20.  Wu, X. L., Cheng, L. J., Huang, X. Inamori Y and Qian, Y. (2000), Contributions of attached- and suspended-growth biomass to pollutants removal in a hybrid bioreactor, Japanese Journal of Water Treatment Biology, 23 (5)1-8.

19.  Wu, X. L., Inamori, Y. and Ebisu, T. (1999), Factors affecting performance of Alcaligenes faecalis in activated sludge process under aerobic conditions, Journal of Japan Society on Water Environment 22:215-221 (日语论文).

18.  Wu, X. L., Inamori, Y. (1999), Characteristics of N2O emission and wastewater treatment in an anoxic activated sludge process added with immobilized Alcaligenes faecalis, Journal of Japan Society on Water Environment 22:511-517 (日语论文).

17.  Inamori, Y., Wu, X. L., and Kimochi, Y. (1999), Characteristics of N2O production by Alcaligenes faecalis under aerobic conditions, Journal of Japan Society on Water Environment,  22:904-909 (日语论文).

16.  吴晓磊,管运涛,黄霞,钱易,1997,“生物钙”法污水处理性能研究,《中国给水排水》, 13(1):36~38.

15.  周平,汪诚文,吴晓磊,钱易,1997,内循环生物流化床处理石化废水的中试研究.《环境科学》,18(1): 26~29.

14.  管运涛,吴晓磊,钱易,蒋展鹏. 生物钙法好氧污泥颗粒化条件研究.《给水排水》,1996,22(11):27~29.

13.  Wu, X. L, Kong, H. N, Mizuochi, M., Inamori, Y., Huang X. and Qian, Y. (1995), Nitrous oxide emission from microorganism, Japanese Journal of Water Treatment Biology, 31 (3).

12.  吴晓磊,人工湿地废水处理机制,《环境科学》,1995, 16 (3): 83-86.

11.  Kong, H. N., Wu, X. L., Inamori, Y. and Sudo, Y. (1995), Comparison of membrane characteristics between cross-flow and aspiration manners in high-concentration sludge hollow fabric membrane process, Japanese Journal of Water Treatment Biology, Supplement No. 15. (日语论文)

10.  Kong, H. N., Inamori, Y., Wu, X. L. and Sudo, Y. (1995), Importance and recent aspect of advanced high-strength organic wastewater treatment, Water and Waste, 37:7-16 (日语论文)

9.    吴晓磊, 俞毓馨, 钱易, 1994,吴晓磊,污染物质在人工湿地中的流向, 《中国给水排水》, 10(1):40~43.

8.    吴晓磊,刘建广,黄霞,俞毓馨,1994,海藻酸钠和聚乙烯醇作为固定化微生物包埋剂的研究,《环境科学》,14(2), 28-31(1993)

7.    吴晓磊, 废水处理中的微生物固定化技术, 《中国给水排水》,1993,9 (5):42-46.

6.    吴居泰,骆毅,吴晓磊,顾胜华,翁习生,吴志宏. 骨科假体相关性感染的末端限制性片段长度多态性分析,中国骨与关节外科, 5:446-450, 2013/10/15.

5.    伍晓林,侯兆伟,李蔚,刘洋,吴晓磊. 原油黏附性细菌的运动及其调控研究,油田化学, 01期, pp 87-91, 2013/3.

4.    乐建君,伍晓林,马亮亮,郭盟华,刘洪涛,麻成斗,吴晓磊. 2012. 鼠李糖脂的复配驱油体系及现场试验. 中国石油大学学报(自然科学版), 2:168-171.

3.    张金娜,柳爱华,吴晓磊,宝福凯. 宏基因组学和代谢组学在人类肠道微生态研究中的应用. 中国热带医学, 06期, pp 770-772+775, 2013/6/18.

2.    顾胜华,阿基业,査伟斌,王广基,吴晓磊,刘林生. 代谢组学研究甲硝唑对高脂血症金黄地鼠机体代谢的影响 .中国药科大学学报, 05期, pp 443-448, 2012/10/25.

1.    何蔚荭; 安明理; 陈国参; 贾彬; 吴晓磊; 王亚南,血液杆菌Haematobacter sp.细胞脂肪酸测定的影响因素。生物技术通报, 2015, 31:217-221.



Paper in submission:

1、   Lihui Hao, Changqiao Chi, Yong Nie Yueqin Tang and Xiao-Lei Wu, Application of “oil-phase” microbes to enhance oil recovery in extra heavy oil reservoir with high water cuta proof-of-concept study Submitted to Science of the Total Environment

2、   Liyun An, YingChun Yan, Yong Nie, Xiao-Lei Wu, Response of microbial communities on cathode with different potentials in a single chamber reactor, Submitted to Environmental Microbiology





B.     发明专利

1.   吴晓磊,聂勇,王淼啸,耿爽,王健伟;通过改变微生物运动性强化微生物采油的方法,专利申请号:201910782140.1

2.   吴晓磊,聂勇,汤岳琴,王健伟;一种通过注入迪茨氏菌属激活内源微生物生物强化采油或污染治理的方法,201910800433.8

3.   王淼啸,聂勇,王健伟,吴晓磊;一种原位培养装置及高通量分离和筛选微生物的方法;201910752950.2CN110423673A

4.   吴晓磊,汤岳琴,王健伟;;一种原油降解微生物功能互补的配伍方法及指导配伍的原油降解菌群;201910782158.1

5.   吴晓磊,汤岳琴,聂勇,王健伟;一种指导微生物的配伍的“相似相容”原则及其提高外源投加微生物功能与效率的配伍方法;201910789175.8

6.   吴晓磊,胡冰,聂勇,吴梦迪;一种利用特定微生物的代谢产物提高其他微生物的石油降解能力的方法和产品;201910788970.5

7.   聂勇,李卫乐,赵雅坤,池昌桥,来国莉,蔚晓燕,刘晓霞,吴晓磊,一种定向激活原油中采油功能微生物的方法,CN104152394B

8.   聂勇,池昌桥,吴晓磊,孔板加样引导装置,CN204008678U

9.   徐莲,刘敏,孙纪全,吴晓磊,一种植物内生短小芽孢杆菌及其菌剂、制法与应用,CN104232532B

10.    孙纪全,刘敏,徐莲,吴晓磊,一种游动微菌及其菌剂和制备与应用,CN104195082B

11.    孙纪全,徐莲,刘敏,吴晓磊,一种红细菌属菌株及其菌剂和制备与应用,CN104293705B

12.    聂勇,汤岳琴,吴晓磊,一种蛋白及其编码基因与降解石油烃的应用,201110029754.6

13.    聂勇 , 吴晓磊 , 汤岳琴 , 谭燕 ,一种蛋白及其编码基因与降解石油烃的应用,CN102617714B

14.    吴晓磊,王蒙,来国莉,聂勇,耿爽,F175‑3蛋白及其编码基因及水解纤维素的应用,CN104388410B

15.    吴晓磊,王蒙,来国莉,聂勇,耿爽,F52‑6蛋白及其编码基因及水解木聚糖的应用,CN104450649B

16.    吴晓磊 ,王蒙 , 来国莉 , 聂勇 , 耿爽;F85‑20蛋白及其编码基因及其作为β葡萄糖苷酶的应用。CN104388409B

17.    吴晓磊 , 王蒙 , 来国莉 , 聂勇 , 耿爽 ;F52‑2蛋白及其编码基因及水解木聚糖的应用。CN104450648B

18.    聂勇,池昌桥,吴晓磊;一种定向激活核心微生物的激活剂及其在微生物采油中的应用;201910788975.8CN110452866A

19.    王一凯 , 王国光 , 杜丽蓉 , 吴晓磊 , 孙纪全 , 李岩 , 李燕 , 张冀鹏。一种粘合剂制备系统及颗粒饲料的制备系统。CN206324203U

20.    鲁安怀、李艳、金松、吴晓磊、郝瑞霞、王长秋、曾翠平、王鑫、丁竑瑞、吕明,光燃料电池,200810114700。

21.    吴晓磊 , 曾景海 , 屈睿 , 晏芸 ,硫酸盐还原原核生物检测的组合基因探针及其检测方法,CN1271217C

22.    吴晓磊 , 郭斌 , 余素林 ,内置微孔滤膜的连通式微生物培养装置及其培养方法,CN101109006B

23.    孙纪全,刘伟强,吴晓磊,赵晶晶,徐莲,周湧,汤岳琴,陈福明,一种红球菌及其菌剂与应用,CN101857846B

24.    吴晓磊 , 孙纪全 , 汤岳琴 , 刘伟强 , 赵晶晶 , 郭鹏 ,一株棒杆菌菌株及其应用,CN101805713B

25.    吴晓磊 , 孙纪全 , 汤岳琴 , 陈福明 , 刘伟强 , 赵晶晶 , 郭鹏 ,一株假单胞菌菌株及其应用,CN101935622B

26.    吴晓磊 , 孙纪全 , 汤岳琴 , 刘伟强 , 赵晶晶 , 郭鹏 ,一株Diaphorobacter菌株及其应用,CN101892174B

27.    吴晓磊 , 汤岳琴 , 池昌桥 , 郭鹏 ,配制荧光原位杂交的杂交液和洗涤液的方法,CN101792803B

28.    吴晓磊 , 汤岳琴 , 郭鹏 , 池昌桥 ,联合吞吐和驱替的微生物采油方法,CN102213087B

29.    吴晓磊,陈卫民, 孙艳梅, 池昌桥,一株具有溶磷和降解苯酚能力的假单胞菌及其应用,CN103820365B

30.    聂勇,税刘扬,池昌桥,来国莉,吴晓磊,一种硫化物矿物的微生物脱硫方法,CN104152207B

31.    晏芸,屈睿,吴晓磊,FISH杂交计数板及其计数方法, 申请国家发明专利,专利号为200510002789.5。

32.    吴晓磊,郭斌,余素林,内置微孔滤膜的连通式微生物培养装置及其培养方法申请号:200710099489.2。



C.    学会发表论文:

1.   石梦; 危伊萍; 路瑞芳; 聂勇; 胡文杰; 吴晓磊,牙周炎患者颊黏膜微生物群落结构研究,中华口腔医学会口腔生物医学专业委员会.

2.   任桂平; 燕迎春; 孙曼仪; 鲁安怀; 吴晓磊; 丁竑瑞新疆岩石漆光-半导体矿物-微生物群落电子传递初探,中国矿物岩石地球化学学会.

3.       会议:2017厌氧互营微生物论坛,特邀报告:Selfishness driving reductive evolution shapes interdependent patterns in spatially structured microbial communities,吴晓磊,2017,成都。

4.       会议:第九届ANRRC国际会议,特邀报告:油藏(原油)——微生物的加拉帕戈斯,吴晓磊,2017,北京。

5.       会议:第十九次全国环境微生物学学术研讨会,特邀报告:代谢产物交流影响微生物的运动性,吴晓磊,2016,重庆。

6.       会议:香山科学会议第582次学术研讨会——“中国微生物组研究计划”,特邀报告:石油微生物组及其定向调控的应用,吴晓磊,2016,北京。

7.       会议:中-德“微生物趋化、环境污染物的生物降解与污染环境修复”双边研讨会(“China-Germany symposium on Microbial chemotaxis and Bioremediation of Environmental Pollutants”),特邀报告:Evolution leads to the mutual dependencies and “Division Of Labor” in the microbial communities,吴晓磊,2016,北京。

8.       会议:第五届地质微生物学术研讨会,特邀报告:产甲烷古菌在油藏微生物群落构建中的重要作用,吴晓磊,2016,武汉。

9.       会议: 2015 Sino-USA Chinese Collaborative Workshop --- Opportunities and Challenges in Synthetic Biology (SUCC SynBio 2015), 特邀报告:Computational simulation of synthetic microbial consortia by an individual-based multicellular metabolism model (IMMM),吴晓磊,2015,天津。

10.    会议:第二十次全国环境微生物学学术研讨会,题目:微生物群落对电子的响应特征,安丽芸,2017,中国杭州。

11.    会议:中国矿物岩石地球化学学会第16届学术年会,题目:石墨阴极作为电子供体条件下的微生物群落演替,燕迎春,2017,西安。

12.    会议:中国生态学学会微生物生态专业委员会2017年年会,题目:Selfishness driving reductive evolution shapes interdependent patterns in spatially structured microbial communities,王淼啸,2017,北京。

13.    会议:16th International Symposium on Microbial Ecology题目:Diverse petroleum microbial community with hydrocarbon degradation function under high pressure anaerobic culture,王璐,2016,加拿大。

14.    会议:第十七次全国环境微生物学学术研讨会,题目:Synergistic function of four novel thermostable glycoside hydrolases from a long-term enriched thermophilic methanogenic community,王蒙,2014,成都。

15.    会议:第十七次全国环境微生物学学术研讨会,题目:迪茨氏属菌的泛基因组分析,方卉,2014,成都。

16.    会议:第十七次全国环境微生物学学术研讨会,题目:迪茨氏Dietziasp.DQ12-45-1b的烷烃降解基因转录调控机制的研究,梁洁良,2014,成都。

17.    会议:国际微生物生态学会第15次会议ISME15,题目:The genome of dimorphic prosthecate Glycocaulis daqingensis sp. nov. isolated from crude oil dictates its adaptability in petroleum environments,耿爽,2014,韩国。

18.    会议北京大学--荷兰瓦赫宁根大学微生物学交流会,题目:Degradation of petroleum hydrocarbons and Biosurfactant Research of A Dietzia Strain,王兴彪,2011,北京。

19.    会议:The 5th International Student Conference on Advanced Science and Technology,题目:Degradation of petroleum hydrocarbons (C6-C40)and crude oil by aDiezia strain,王兴彪,2010,日本。

20.    会议:The 5th International Student Conference on Advanced Science and Technology,题目:Simulation of microbial function on crude oil by a single microfluidic channel,王璐,2010,日本。

21.    会议:The Second International Student Conference for Advanced Science and Technology,题目:Survival of bacteria in/on crude oil and their stimulation by different initial bacteria,王兴彪,2008,北京。

22.     Precisely manipulating microbial community-an important way for effective environmental biotechnology, 第40回日本水環境学会シンポジウム,日本东京,2006年9月5-6日

23.    武井奨太、安 明哲、柳 澤深、郭 鵬、湯 岳琴、呉 暁磊、木田建次,コーンストーバの濃硫酸糖化法によるバイオエタノールの生産(玉米秸秆的浓硫酸糖化法生产燃料乙醇),平成21年度日本生物工学会講演要旨集, 9月24日, 2009, 名古屋

24.    Qu, R., Wu, Y. M., Zhao, J. Y., Wang, Y. N., Wu*, X. L., Comparison of culture-dependant method and FISH analysis for Detection of Sulfate-reducing prokaryotes in injection water of oil field, 5th IWA World Congress, Sept 13-16, 2006, Beijing

25.    Wu, X. L., Wang, Y. N., Zhao, G. F. and Yu, S. L. Increasing microbial culturability for effective degradation of oil pollutants, Proceedings of the 40th annual conference of Japan Society of Water Environment, Sendai, Japan, Mar 15-17, 2006.

26.    Wu, X. L., Zhang, X., Guan, Y. T., Qian, Y., Ferric-induced aerobic activated sludge granulation and its use for phosphorus removal and greenhouse gas N2O emission control,4th IWA World Water Congress in Marrakech, Morocco, September 19-24, 2004.

27.    Wu, X. L., Zhang, X., Inamori, Y., Increase nitrogen removal and reduce nitrous oxide emission by adjusting activated sludge microbial community, 4th IWA World Water Congress in Marrakech, Morocco, September 19-24, 2004.

28.    Wu, X. L., Conrad, R. Structure gradient of an archaeal community of in an oil-polluted saline soil, 1st Sino-German Symposium on Environmental Microbiology, 1-6 August, 2004, Beijing, China

29.    Inamori, Y., Wu, X. L., Kimochi, Y., Shinosaki, K. and Sudo, Y., Technology development for renovating the polluted lake environment using ecological engineering approaches and overall assessment of the developed system, 8th international Conference on Conservation and Management of Lake, Copenhagen, Denmark, May 17-21, 1999.

30.    Inamori, Y., Wu, X. L., Mizuochi, M., Nakamura, E., Odaka, M., Suzuki, Y. and Tsuruta, H., Control of anthropogenic N2O-a greenhouse gas-emission from several man-related fields, Proceedings of the 7th Japanese-German Workshop on Wastewater and Sludge Treatment, Kyoto, Japan, Dec 11-12, 1997.

31.    Wu, X. L., Qian, Y. and Huang, X., Performance of a biological hybrid reactor, Proceedings of 6th IAWQ Asia-Pacific Regional Conference, Seoul, Korea, May 20-23, 1997.

32.    Wu, X. L., Inamori, Y. and Mizuochi, M., Greenhouse gas-N2O production by Alcaligenes faecalis, a typical nitrifying denitrifier, under anoxic conditions, Proceedings of 8th International Conference on Anaerobic Digestion, Sendai, Japan, May 24-27, 1997.

33.    Wu, X. L., Inamori, Y. and Mizuochi, M., Contribution of Alcaligenes faecalis-a nitrifying denitrifying bacterium to N2O emission in activated sludge process, Proceedings of 7th International Workshop on N2O Emission, Cologne, Germany, April 21-23, 1997

34.    Inamori, Y., Wu, X. L., Mizuochi, M., Odaka, M., Suzuki, Y., Tsuruta, H., Study on development and assessment of strategy and technology for control greenhouse gases CH4 and N2O, Proceedings of 7th International Workshop on N2O Emission, Cologne, Germany, April 21-23, 1997.

35.    Wu, X. L., Guan, Y., Huang, X. and Qian, Y., Influence of flow boundary layer on initial microbial attachment to carrier surface and on initial biofilm building-up. Proceedings of International Conference on Adsorption in Wastewater Treatment, Shirahama, Wakayama, Japan, November 6-8, 1996.

36.    Wu, X. L., Qian, Y. and Huang, X. Phosphorus removal and simultaneously upgrading treatment capability of activated sludge process by adding some chemicals into the aeration tank, Proceedings of International Conference on Advanced Wastewater Treatment, Amsterdam, The Netherlands, September 23-25, 1996.

37.    Wu, X. L., Inamori, Y. and Mizuochi, M., Greenhouse gas-N2O production by Alcaligenes faecalis, Proceedings of 2nd International Conference on Microorganisms in Activated sludge and Biofilm Processes, Berkeley, California, USA, July 21-24, 1997

38.    木持謙、水落元之、呉暁磊、稲森悠平、松村正利:生物学的硝化反応における窒素負荷とN2O発生との関係、日本水処理生物学会第32回大会、大阪、1995年11月

39.    孔海南、呉暁磊、稲森悠平、須藤隆一:高濃度活性汚泥・中空糸膜分離法における膜のクロスフロー式と吸引式の比較、日本水処理生物学会第32回大会、大阪、1995年11月

40.    Xiao-Lei Wu, Y. Inamori, M. Mizuochi, Hai-Nan Kong: Behaviors of immobilized nitrifying and denitrifying biofilm toward N2O production, 第30回日本水環境学会年会、福岡、1996年3月

41.    孔海南、稲森悠平、呉暁磊、須藤隆一:活性汚泥・膜分離法におけるクロスフローと吸引膜分離式との処理特性、膜Fluxの比較、第30回日本水環境学会年会、福岡、1996年3月。

42.    Xiao-Lei Wu, Yuhei Inamori, Motoyuki Mizuochi:N2O production by Alcaligenes faecalis, a nitrifying denitrifier. 日本水処理生物学会第33回大会、つュば、1996年11月

43.    Xiao-Lei Wu, Yuhei Inamori, Motoyuki Mizuochi : Behaviors of heterotrophic nitrifier Alcaligenes faecalis to N2O emission in activated sludge process under aerobic conditions, 第31回日本水環境学会年会、札幌、1997年3月

44.    Xiao-Lei Wu, Yuhei Inamori, Yuzuru Kimochi : Factors affecting N2O emission from an activated sludge system with Alcaligenes faecalis introduced into under anoxic conditions、日本水処理生物学会第34回大会、広島、1997年11月

45.    Xiao-Lei Wu, Yuhei Inamori : Reducing N2O emission by adding immobilized Alcaligenes faecalis into intermittent activated sludge system,第32回日本水環境学会年会、習志野、1998年3月

46.    Man Cai, Wang Lu, Yue-Qin Tang, Xiao-Lei Wu. Isolation and Identification of Hard-to-Culture Microorganisms from Polluted Environments. Japanese Society of Water Treatment Biology, Kouchi, 2009. 11.11-13

47.    武井奨太、安 明哲、柳 澤深、郭 鵬、湯 岳琴、呉 暁磊、木田建次,コーンストーバの濃硫酸糖化法によるバイオエタノールの生産,平成21年度日本生物工学会講演要旨集, 9月24日, 2009, 名古屋

48.    Xiao-Lei Wu, Su-Lin Yu, Yue-Qin Tang. Bioremediation of Hydrocarbon Pollution by Biostimulation and Bioaugmentation. Japanese Society of Water Treatment Biology, Kouchi, 2009. 11.11-13

49.    吴晓磊,油藏微生物和微生物采油技术,微生物-矿物相互作用第二次研讨会,南京,2006年11月25-26日

50.    吴晓磊,微生物采油技术的技术思路和关键问题,第十次全国土壤生物与生物化学学术研讨会,南京,2005年11月14-15日

51.    Wu, X L, Environmental biotechnology in oil extraction industry, from pollution control to cleaner production, 1st international high-level forum on Bioeconomy, September 14-16, 2005 Beijing, China.

52.    吴晓磊, 管运涛, 黄霞, 钱易, 生物钙处理生活污水研究, 第四届全国环境微生物污染防治与资源化研讨会, 1994

53.    吴晓磊, 李铁, 黄霞, 钱易, Fe离子对活性污泥性能影响研究, 第四届全国环境微生物污染防治与资源化研讨会, 1994